.github/testsheet/README.md at main · openworm/.github

Tests on OpenWorm active repositories

Core OpenWorm

Repository	Tests	Tests (development)	PRs
OpenWorm Docker ^{Repository for the main Dockerfile with the complete OpenWorm software stack. Also hosts project-wide issues.}
c302 ^{The c302 framework for generating multiscale network models of C. elegans}
Sibernetic ^{A C++/OpenCL implementation of the PCISPH algorithm supplemented with a set of biomechanics related features applied to C. elegans locomotion}
C. elegans Connectome Toolbox ^{Information on published connectomics data related to C. elegans.}		-
Hodgkin Huxley Tutorial ^{A repository containing code for a number of tutorials on the Hodgkin Huxley model, including an interactive Jupyter notebook}
Muscle model - Boyle & Cohen 2008 ^{Model of C. elegans body wall muscle based on Boyle & Cohen 2008}
Muscle model - Johnson & Mailler 2015 ^{C. elegans muscle model from Johnson & Mailler 2015}
AWCon and RMD neuron models - Nicoletti et al. 2019 ^{Biophysical modeling of C. elegans neurons: Single ion currents and whole-cell dynamics of AWCon and RMD}
Biophysical models of C. elegans motor and interneurons - Nicoletti et al. 2024 ^{Biophysical modeling of the whole-cell dynamics of C. elegans motor and interneurons families}
NeuroPAL ^{Scripts to analyse and convert NeuroPAL datasets}
Blender2NeuroML ^{Conversion script to bring neuron models created in Blender into NeuroML format}
C. elegans Neuromechanical Gait Modulation ^{C. elegans neuromechanical gait modulation model from Boyle, Berri and Cohen 2012}
2D worm body model ^{Neuromechanical model of locomotion in C. elegans, originally developed by Eduardo Izquerdo, Erick Olivares and Randall Beer}